PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_04029-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 322aa    MW: 34960.6 Da    PI: 7.8698
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_04029-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.32.4e-07131208355
                      HHHHHHHHHHHHHHHHHHHHHHCTSCCC..........................TTS-..STCHHHHHHHHHHHHHHH CS
              HLH   3 rahnerErrRRdriNsafeeLrellPkas.......................kapskK..lsKaeiLekAveYIksLq 55 
                      + h ++Er+RR+++ + f  L +++P +                        ++++     +K + L  +++Y+k+L+
  TRIUR3_04029-P1 131 QEHVIAERKRREKLQQQFVSLATIVPGLKkvrdkttwlhlrdhqvpagcslnSGHCHIiqTDKLSLLGSTIDYVKNLE 208
                      5799***********************777999999999999999999999944444436999999999999999985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.57E-10126158IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.941128207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.1E-12131212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.8E-5132208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.49E-5133212No hitNo description
SMARTSM003532.7E-6134213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-10184221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
PCQEQEELAY MYQQEGGPVP VPSREQQFAE PPLPGHEEQC YTPPMATPAF NPSCSSNFPS  60
FAGSSSLPNL PFGSAMVKNE LGQPSPPPSS NFLSFGAGQA STLNFSGWQR DRVQGTMQQL  120
QAPERRGRAP QEHVIAERKR REKLQQQFVS LATIVPGLKK VRDKTTWLHL RDHQVPAGCS  180
LNSGHCHIIQ TDKLSLLGST IDYVKNLEEK VKALEQGSRR SSESMVFDSK CCISAPNNDA  240
AGPSGSGSGS GYSSPDIEAS IRGNTALLNI CCKKRRGVLV MILSELENQG LSIINTNVIP  300
FTDSCLNITI TAKARPLCPG HI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1136141ERKRRE
2137142RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010230206.11e-113PREDICTED: transcription factor bHLH18-like isoform X1
RefseqXP_014752081.11e-113PREDICTED: transcription factor bHLH18-like isoform X2
TrEMBLT1LH740.0T1LH74_TRIUA; Uncharacterized protein
STRINGBRADI1G69110.11e-116(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP64013149
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.16e-22bHLH family protein